STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_06107AraC family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
FOXG_03223
TATA-box-binding protein.
   
 0.729
A0A0D2YC15
CID domain-containing protein.
     
 0.676
FOXG_00452
Transcription initiation factor TFIIB.
    
 0.675
FOXG_08478
Uncharacterized protein.
   
 0.669
FOXG_00826
Transcription initiation factor TFIID subunit 9B.
     
 0.662
A0A0D2XJW5
HTH TFE/IIEalpha-type domain-containing protein.
    
  0.657
A0A0D2XK72
Uncharacterized protein.
    
 0.657
FOXG_11362
Transcription initiation factor TFIIF subunit alpha.
     
 0.650
FOXG_00976
Uncharacterized protein.
   
 
  0.649
FOXG_07900
HMG box domain-containing protein.
    
 0.642
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.