STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_07958Vesicle transporter SEC22; Belongs to the synaptobrevin family. (215 aa)    
Predicted Functional Partners:
FOXG_03674
Syntaxin 5.
   
 0.999
FOXG_04216
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.997
A0A0D2XVX7
Uncharacterized protein.
    
 0.997
FOXG_08214
Synaptobrevin; Belongs to the synaptobrevin family.
    
 0.997
FOXG_10410
Uncharacterized protein.
    
 0.997
FOXG_08026
Uncharacterized protein.
   
 0.995
A0A0D2Y4S6
t-SNARE coiled-coil homology domain-containing protein.
   
 0.995
FOXG_06195
Blocked early in transport 1.
   
 0.994
FOXG_00372
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.992
FOXG_12782
Vesicle transport through interaction with t-SNAREs 1.
   
 0.989
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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