STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2YEX5Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
A0A0D2XUZ1
Uncharacterized protein.
   
 0.855
FOXG_00293
Chromatin modification-like protein EAF6.
    
 0.846
A0A0D2YKU5
MRG domain-containing protein.
    
 0.831
FOXG_07899
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.798
FOXG_05430
SWR1-complex protein 4.
   
 0.784
FOXG_01488
Enhancer of polycomb-like protein.
   
 0.769
A0A0D2XDL3
Uncharacterized protein.
    
 0.737
A0A0D2XE53
PHD-type domain-containing protein.
    
 0.737
FOXG_00834
Actin-like protein 4; Belongs to the actin family.
   
 0.706
A0A0D2XX96
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.705
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.