STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ67720.1Protein of unknown function. (156 aa)    
Predicted Functional Partners:
SDJ67749.1
Phage minor structural protein, N-terminal region.
       0.800
SDJ67781.1
Putative phage tail component, N-terminal domain-containing protein.
       0.800
SDJ67840.1
Bacteriophage Gp15 protein.
       0.785
SDJ67813.1
Tape measure domain-containing protein.
       0.775
SDJ67875.1
Hypothetical protein.
       0.773
SDJ67661.1
Hypothetical protein.
       0.655
SDJ67693.1
Protein of unknown function.
       0.655
SDJ67935.1
Bacteriophage minor capsid protein.
       0.644
SDJ68032.1
Hypothetical protein.
       0.641
SDJ67905.1
Hypothetical protein.
       0.633
Your Current Organism:
Alkalibacterium thalassium
NCBI taxonomy Id: 426701
Other names: A. thalassium, Alkalibacterium thalassium Ishikawa et al. 2009, DSM 19181, NBRC 103241, NRIC 0718, strain T117-1-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.