node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ69729.1 | rplF | SAMN04488098_1002106 | SAMN04488098_100715 | LSU ribosomal protein L7AE. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
SDJ69729.1 | rplO | SAMN04488098_1002106 | SAMN04488098_100711 | LSU ribosomal protein L7AE. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.998 |
SDJ69729.1 | rplR | SAMN04488098_1002106 | SAMN04488098_100714 | LSU ribosomal protein L7AE. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
SDJ69729.1 | rpmD | SAMN04488098_1002106 | SAMN04488098_100712 | LSU ribosomal protein L7AE. | Large subunit ribosomal protein L30. | 0.999 |
SDJ69729.1 | rpsB | SAMN04488098_1002106 | SAMN04488098_1002119 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
SDJ69729.1 | rpsD | SAMN04488098_1002106 | SAMN04488098_10033 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
SDJ69729.1 | rpsE | SAMN04488098_1002106 | SAMN04488098_100713 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
SDJ69729.1 | rpsH | SAMN04488098_1002106 | SAMN04488098_100716 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
SDJ69729.1 | rpsK | SAMN04488098_1002106 | SAMN04488098_10076 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
SDJ69729.1 | rpsO | SAMN04488098_1002106 | SAMN04488098_100532 | LSU ribosomal protein L7AE. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplF | SDJ69729.1 | SAMN04488098_100715 | SAMN04488098_1002106 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L7AE. | 0.999 |
rplF | rplO | SAMN04488098_100715 | SAMN04488098_100711 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplF | rplR | SAMN04488098_100715 | SAMN04488098_100714 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplF | rpmD | SAMN04488098_100715 | SAMN04488098_100712 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Large subunit ribosomal protein L30. | 0.999 |
rplF | rpsB | SAMN04488098_100715 | SAMN04488098_1002119 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplF | rpsD | SAMN04488098_100715 | SAMN04488098_10033 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
rplF | rpsE | SAMN04488098_100715 | SAMN04488098_100713 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplF | rpsH | SAMN04488098_100715 | SAMN04488098_100716 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
rplF | rpsK | SAMN04488098_100715 | SAMN04488098_10076 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplF | rpsO | SAMN04488098_100715 | SAMN04488098_100532 | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |