Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ73669.1 | SDK05671.1 | SAMN04488098_100341 | SAMN04488098_10119 | Uncharacterized protein YkuJ. | Cell division protein DivIC. | 0.634 |
SDJ73669.1 | SDK28377.1 | SAMN04488098_100341 | SAMN04488098_102111 | Uncharacterized protein YkuJ. | Uncharacterized protein YpbB. | 0.502 |
SDK05624.1 | SDK05671.1 | SAMN04488098_10118 | SAMN04488098_10119 | S1 RNA binding domain protein. | Cell division protein DivIC. | 0.633 |
SDK05624.1 | tilS | SAMN04488098_10118 | SAMN04488098_10117 | S1 RNA binding domain protein. | Bifunctional protein TilS/HprT; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.621 |
SDK05671.1 | SDJ73669.1 | SAMN04488098_10119 | SAMN04488098_100341 | Cell division protein DivIC. | Uncharacterized protein YkuJ. | 0.634 |
SDK05671.1 | SDK05624.1 | SAMN04488098_10119 | SAMN04488098_10118 | Cell division protein DivIC. | S1 RNA binding domain protein. | 0.633 |
SDK05671.1 | SDK09026.1 | SAMN04488098_10119 | SAMN04488098_101217 | Cell division protein DivIC. | Conserved hypothetical integral membrane protein. | 0.577 |
SDK05671.1 | SDK28377.1 | SAMN04488098_10119 | SAMN04488098_102111 | Cell division protein DivIC. | Uncharacterized protein YpbB. | 0.623 |
SDK05671.1 | SDK43612.1 | SAMN04488098_10119 | SAMN04488098_103019 | Cell division protein DivIC. | Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.551 |
SDK05671.1 | SDK89501.1 | SAMN04488098_10119 | SAMN04488098_10821 | Cell division protein DivIC. | Tetratricopeptide repeat-containing protein. | 0.577 |
SDK05671.1 | divIB | SAMN04488098_10119 | SAMN04488098_100322 | Cell division protein DivIC. | Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.995 |
SDK05671.1 | ezrA | SAMN04488098_10119 | SAMN04488098_10031 | Cell division protein DivIC. | Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.548 |
SDK05671.1 | ftsL | SAMN04488098_10119 | SAMN04488098_100327 | Cell division protein DivIC. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.801 |
SDK05671.1 | tilS | SAMN04488098_10119 | SAMN04488098_10117 | Cell division protein DivIC. | Bifunctional protein TilS/HprT; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.552 |
SDK09026.1 | SDK05671.1 | SAMN04488098_101217 | SAMN04488098_10119 | Conserved hypothetical integral membrane protein. | Cell division protein DivIC. | 0.577 |
SDK09026.1 | SDK28377.1 | SAMN04488098_101217 | SAMN04488098_102111 | Conserved hypothetical integral membrane protein. | Uncharacterized protein YpbB. | 0.401 |
SDK09026.1 | divIB | SAMN04488098_101217 | SAMN04488098_100322 | Conserved hypothetical integral membrane protein. | Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.455 |
SDK28377.1 | SDJ73669.1 | SAMN04488098_102111 | SAMN04488098_100341 | Uncharacterized protein YpbB. | Uncharacterized protein YkuJ. | 0.502 |
SDK28377.1 | SDK05671.1 | SAMN04488098_102111 | SAMN04488098_10119 | Uncharacterized protein YpbB. | Cell division protein DivIC. | 0.623 |
SDK28377.1 | SDK09026.1 | SAMN04488098_102111 | SAMN04488098_101217 | Uncharacterized protein YpbB. | Conserved hypothetical integral membrane protein. | 0.401 |
page 1 of 3