STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK46856.1Diamine N-acetyltransferase. (150 aa)    
Predicted Functional Partners:
SDK98064.1
Diamine N-acetyltransferase.
  
  0.836
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.782
SDK46437.1
Chorismate mutase.
    
  0.739
SDK41629.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
 
  0.653
SDK82066.1
Macrolide phosphotransferase.
  
 
  0.633
SDK46895.1
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.602
SDK84744.1
3-hydroxyacyl-CoA dehydrogenase.
    
  0.589
SDK46932.1
Hypothetical protein.
 
     0.531
SDK27411.1
Aminoglycoside 6'-N-acetyltransferase I.
 
    0.510
SDK20674.1
DNA-binding transcriptional regulator, MerR family.
 
  
 0.498
Your Current Organism:
Alkalibacterium thalassium
NCBI taxonomy Id: 426701
Other names: A. thalassium, Alkalibacterium thalassium Ishikawa et al. 2009, DSM 19181, NBRC 103241, NRIC 0718, strain T117-1-2
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