STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK41395.15-bromo-4-chloroindolyl phosphate hydrolysis protein. (222 aa)    
Predicted Functional Partners:
SEK41435.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
  
 0.982
SEK39522.1
Predicted membrane protein.
  
   
 0.809
SEK18929.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
  
 0.788
SEL21065.1
Gas vesicle protein.
  
     0.768
SEK39473.1
Two-component system, NarL family, sensor histidine kinase LiaS.
  
    0.722
SEL20770.1
Predicted transcriptional regulator containing CBS domains.
  
     0.710
SEL34272.1
Nucleoside 2-deoxyribosyltransferase.
  
     0.701
SEL16702.1
Uncharacterized protein YoxC, contains an MCP-like domain.
  
     0.661
SEK35497.1
LysM domain-containing protein.
  
     0.657
SEK39435.1
Two-component system, NarL family, response regulator LiaR.
  
     0.613
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.