STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (160 aa)    
Predicted Functional Partners:
SEK46518.1
Flagellar motor switch protein FliN/FliY.
 
 0.999
SEK46692.1
Chemotaxis protein CheC.
 
 0.999
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.997
SEK46731.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 
 0.992
SEK46943.1
Methyl-accepting chemotaxis protein.
 
  0.982
SEK46777.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.975
SEK96309.1
Methyl-accepting chemotaxis protein.
 
  0.971
SEK46905.1
Purine-binding chemotaxis protein CheW.
 
 
 0.970
SEK46978.1
Methyl-accepting chemotaxis protein.
 
  0.969
SEK89884.1
Methyl-accepting chemotaxis protein.
 
  0.952
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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