STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK47635.1Putative aldouronate transport system substrate-binding protein. (532 aa)    
Predicted Functional Partners:
SEK47559.1
Putative aldouronate transport system permease protein.
 
  0.958
SEK47590.1
Putative aldouronate transport system permease protein.
 
 
  0.927
SEK48981.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.906
SEK60641.1
Putative aldouronate transport system permease protein.
 
  0.870
SEK49022.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.843
SEK48221.1
Putative aldouronate transport system substrate-binding protein.
  
  
  0.836
SEK60599.1
Putative aldouronate transport system permease protein.
 
 
  0.836
SEK47509.1
Uncharacterized membrane protein YesL.
 
     0.780
SEL37624.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.739
SEK20277.1
ABC-type glycerol-3-phosphate transport system, permease component.
  
  0.625
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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