STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK48145.1Multiple sugar transport system substrate-binding protein. (422 aa)    
Predicted Functional Partners:
SEK48106.1
Multiple sugar transport system permease protein.
 
  0.922
SEK48060.1
Multiple sugar transport system permease protein.
 
  0.917
SEL37624.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.761
SEK47952.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.714
SEK51400.1
Multiple sugar transport system permease protein.
  
  0.712
SEK51364.1
Multiple sugar transport system permease protein.
  
  0.648
SEK47559.1
Putative aldouronate transport system permease protein.
  
  0.648
SEK61125.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.647
SEK61156.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.645
SEK20243.1
Multiple sugar transport system permease protein.
  
  0.638
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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