STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK61125.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (295 aa)    
Predicted Functional Partners:
SEL37624.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.979
SEK61156.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.977
SEK61193.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  0.960
SEK70830.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 0.955
SEK51082.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.939
SEK20277.1
ABC-type glycerol-3-phosphate transport system, permease component.
 
  0.933
SEK80013.1
ABC-type glycerol-3-phosphate transport system, permease component.
 
  0.932
SEK49569.1
Multiple sugar transport system substrate-binding protein.
 0.921
SEK70927.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 0.916
SEK51364.1
Multiple sugar transport system permease protein.
 
  0.909
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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