STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK59508.1NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family. (202 aa)    
Predicted Functional Partners:
SEK24110.1
SH3 domain-containing protein.
   
    0.642
SEK99628.1
Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.593
SEK17901.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
   
  
 0.530
SEL14354.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
   
  
 0.530
SEK72302.1
Catalase; Belongs to the catalase family.
   
  
 0.517
SEK40191.1
Nucleotide-binding universal stress protein, UspA family.
   
 
 0.443
SEK59733.1
Glutamate synthase (NADPH/NADH) large chain.
   
  
 0.420
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.