STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL02142.1Cd2+/Zn2+-exporting ATPase. (629 aa)    
Predicted Functional Partners:
SEL02099.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
    0.760
SEK83892.1
Cu+-exporting ATPase.
  
  
0.551
SEL13939.1
Cu+-exporting ATPase.
  
  
0.551
SEL08310.1
Cu+-exporting ATPase.
  
  
0.542
SEL13471.1
Mercuric reductase.
  
 
 0.474
SEL02211.1
Catechol 2,3-dioxygenase.
       0.459
SEK83857.1
Copper chaperone CopZ.
   
   0.455
SEL13998.1
Heavy-metal-associated domain-containing protein.
   
   0.455
SEL14253.1
Copper chaperone CopZ.
   
   0.455
SEL14316.1
Copper ion binding protein.
   
   0.455
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.