STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL01955.1PTS system, mannose-specific IIB component. (163 aa)    
Predicted Functional Partners:
SEL01844.1
PTS system, mannose-specific IID component.
 
 0.999
SEL01879.1
PTS system, mannose-specific IIC component.
 
 0.999
SEL01918.1
PTS system, mannose-specific IIB component.
 
 
0.986
SEL22208.1
Phosphocarrier protein.
   
 0.930
SEK77150.1
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
  
 
 0.899
SEK57755.1
PTS system, fructose subfamily, IIC component.
   
 
 0.860
SEK21028.1
Mannose-6-phosphate isomerase, type 1.
    
 0.818
SEL01996.1
Transcriptional regulatory protein LevR, contains PRD, AAA+ and EIIA domains.
 
   
 0.754
SEK17858.1
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
  0.550
SEK77106.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
    
 0.539
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.