STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL07428.1PglZ domain-containing protein. (488 aa)    
Predicted Functional Partners:
SEL07469.1
DNA methylase.
 
     0.953
SEL07503.1
Hypothetical protein.
 
    0.953
SEL07539.1
Hypothetical protein.
 
     0.950
SEL07368.1
Hypothetical protein.
 
     0.949
SEK24974.1
Glycerophosphoryl diester phosphodiesterase.
 
 
 0.904
SEL35691.1
Adenosine deaminase.
     
 0.555
SEK20696.1
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.553
SEK41358.1
ADP-ribose pyrophosphatase.
     
 0.551
SEL07572.1
Hypothetical protein; Belongs to the 'phage' integrase family.
 
     0.547
SEK63336.1
Deoxyadenosine/deoxycytidine kinase.
    
  0.508
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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