STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL08310.1Cu+-exporting ATPase. (833 aa)    
Predicted Functional Partners:
SEK17775.1
Superoxide dismutase, Cu-Zn family.
   
 0.986
SEK83892.1
Cu+-exporting ATPase.
 
 
0.928
SEL13939.1
Cu+-exporting ATPase.
 
 
0.927
SEL08338.1
Copper transport repressor, CopY/TcrY family.
  
  
 0.849
SEL13471.1
Mercuric reductase.
  
 
 0.611
SEK85171.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.591
SEL14023.1
Cu2+-exporting ATPase.
  
  
0.567
SEL13229.1
Cd2+/Zn2+-exporting ATPase.
  
  
0.565
SEL14583.1
Cd2+/Zn2+-exporting ATPase.
  
  
0.564
SEL08277.1
Methyltransferase domain-containing protein.
       0.555
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.