STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL14284.1Cd2+/Zn2+-exporting ATPase. (631 aa)    
Predicted Functional Partners:
SEL14316.1
Copper ion binding protein.
 
   0.900
SEL14253.1
Copper chaperone CopZ.
 
   0.873
SEL33511.1
Copper chaperone CopZ.
  
   0.850
SEL33438.1
Copper ion binding protein.
  
   0.835
SEL33472.1
Regulator of cell morphogenesis and NO signaling.
 
     0.594
SEL33397.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
     0.576
SEL08310.1
Cu+-exporting ATPase.
  
  
0.545
SEK83892.1
Cu+-exporting ATPase.
  
  
0.531
SEL13939.1
Cu+-exporting ATPase.
  
  
0.529
SEL13471.1
Mercuric reductase.
  
 
 0.474
Your Current Organism:
Alkalibacterium pelagium
NCBI taxonomy Id: 426702
Other names: A. pelagium, Alkalibacterium pelagium Ishikawa et al. 2009, DSM 19183, NBRC 103242, NRIC 0719, strain T143-1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.