STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL43760.1Uncharacterized protein YlbG, UPF0298 family. (102 aa)    
Predicted Functional Partners:
SEL43736.1
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD.
  
    0.865
SEL43670.1
PDZ domain-containing protein.
 
     0.808
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.781
SEL43794.1
Uncharacterized protein YlaN, UPF0358 family; Belongs to the UPF0358 family.
 
     0.727
SEM12118.1
Uncharacterized protein YkuJ.
  
     0.656
SEL40028.1
Uncharacterized integral membrane protein.
  
     0.608
SEM12636.1
YggT family protein.
  
     0.566
SEL86557.1
Uncharacterized protein YutD.
  
   
 0.537
SEL54638.1
Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
     0.530
SEL72108.1
Gas vesicle protein.
  
    0.517
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.