STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL54098.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (477 aa)    
Predicted Functional Partners:
SEL95738.1
Uncharacterized protein; PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6).
 
 0.937
SEL95501.1
PTS system, glucose-specific IIC component.
  
 
 0.897
SEL75617.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.839
SEL75566.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.808
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.771
SEL82010.1
Glucokinase.
   
 
  0.766
SEL64982.1
PTS system IIA component, Glc family (TC 4.A.1).
   
 
  0.763
SEM06651.1
PTS system, glucose-specific IIA component.
   
 
  0.763
SEM03410.1
PTS system, cellobiose-specific IIB component.
  
 
 0.708
SEM31364.1
PTS system, cellobiose-specific IIB component.
  
 
 0.708
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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