STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL61016.1Phage terminase small subunit. (149 aa)    
Predicted Functional Partners:
SEL60980.1
Phage terminase, large subunit, PBSX family.
 
  
 0.976
SEL60957.1
Phage portal protein, SPP1 family.
 
  
 0.942
SEL60927.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.863
SEL60551.1
Hypothetical protein.
 
   
 0.664
SEL60875.1
Hypothetical protein.
 
   
 0.631
SEL61054.1
Hypothetical protein.
       0.603
SEL60525.1
Phage tail protein.
 
    0.599
SEL60485.1
Phage minor structural protein, N-terminal region.
 
     0.577
SEL60898.1
Phage minor structural protein GP20.
  
    0.512
SEL88501.1
DNA-damage-inducible protein J.
  
    0.468
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.