STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL71002.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (318 aa)    
Predicted Functional Partners:
SEL71032.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEL71069.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.999
SEL71099.1
Basic membrane protein A.
 
 
 0.996
rbsA
Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  0.770
SEL47644.1
Multiple sugar transport system permease protein.
   
 
  0.463
SEL48378.1
Multiple sugar transport system permease protein.
   
 
  0.463
SEL62226.1
Raffinose/stachyose/melibiose transport system permease protein.
   
 
  0.463
SEL65902.1
Multiple sugar transport system permease protein.
   
 
  0.463
SEL82971.1
lactose/L-arabinose transport system permease protein.
   
 
  0.463
SEL84212.1
Multiple sugar transport system permease protein.
   
 
  0.463
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.