STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL95296.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (436 aa)    
Predicted Functional Partners:
SEL95351.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.999
SEL95320.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 0.998
SEM18811.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.998
SEL95378.1
Pullulanase, extracellular; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.917
SEL62226.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.894
SEL48378.1
Multiple sugar transport system permease protein.
 0.892
SEL65902.1
Multiple sugar transport system permease protein.
 
 0.885
SEL82971.1
lactose/L-arabinose transport system permease protein.
 0.882
SEL47644.1
Multiple sugar transport system permease protein.
 
 0.881
SEL81754.1
Protein of unknown function.
  
 
 0.870
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.