STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL96862.1CAAX protease self-immunity. (227 aa)    
Predicted Functional Partners:
SEL96888.1
Hypothetical protein.
       0.678
SEL80413.1
Hypothetical protein.
  
     0.673
SEL57888.1
Hypothetical protein.
  
     0.620
SEL97670.1
Hypothetical protein.
  
     0.614
SEL83925.1
ABC-2 type transport system permease protein.
  
    0.611
SEL62465.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.604
SEM09858.1
Transcriptional regulator, TetR family.
  
     0.599
SEL74466.1
Hypothetical protein.
  
     0.547
SEL83954.1
ABC-2 type transport system permease protein.
  
    0.541
SEL62490.1
LPXTG-motif cell wall anchor domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.
  
     0.534
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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