Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL52270.1 | SEM11626.1 | SAMN04488100_10314 | SAMN04488100_12637 | Nitrogen fixation protein NifU. | Glyoxylase, beta-lactamase superfamily II. | 0.443 |
SEL52270.1 | SEM15055.1 | SAMN04488100_10314 | SAMN04488100_12918 | Nitrogen fixation protein NifU. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.605 |
SEL52270.1 | SEM27118.1 | SAMN04488100_10314 | SAMN04488100_1432 | Nitrogen fixation protein NifU. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.605 |
SEL68515.1 | SEM11626.1 | SAMN04488100_10740 | SAMN04488100_12637 | Protein of unknown function. | Glyoxylase, beta-lactamase superfamily II. | 0.470 |
SEL96805.1 | SEM11626.1 | SAMN04488100_11814 | SAMN04488100_12637 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Glyoxylase, beta-lactamase superfamily II. | 0.557 |
SEL96805.1 | SEM28679.1 | SAMN04488100_11814 | SAMN04488100_1453 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.524 |
SEL96805.1 | SEM35897.1 | SAMN04488100_11814 | SAMN04488100_1595 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Catechol 2,3-dioxygenase. | 0.623 |
SEM11180.1 | SEM11626.1 | SAMN04488100_12619 | SAMN04488100_12637 | Glycolate oxidase. | Glyoxylase, beta-lactamase superfamily II. | 0.506 |
SEM11180.1 | SEM15055.1 | SAMN04488100_12619 | SAMN04488100_12918 | Glycolate oxidase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.823 |
SEM11180.1 | SEM27118.1 | SAMN04488100_12619 | SAMN04488100_1432 | Glycolate oxidase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.823 |
SEM11180.1 | SEM28679.1 | SAMN04488100_12619 | SAMN04488100_1453 | Glycolate oxidase. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.724 |
SEM11180.1 | SEM29682.1 | SAMN04488100_12619 | SAMN04488100_14615 | Glycolate oxidase. | Protease I. | 0.522 |
SEM11626.1 | SEL52270.1 | SAMN04488100_12637 | SAMN04488100_10314 | Glyoxylase, beta-lactamase superfamily II. | Nitrogen fixation protein NifU. | 0.443 |
SEM11626.1 | SEL68515.1 | SAMN04488100_12637 | SAMN04488100_10740 | Glyoxylase, beta-lactamase superfamily II. | Protein of unknown function. | 0.470 |
SEM11626.1 | SEL96805.1 | SAMN04488100_12637 | SAMN04488100_11814 | Glyoxylase, beta-lactamase superfamily II. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.557 |
SEM11626.1 | SEM11180.1 | SAMN04488100_12637 | SAMN04488100_12619 | Glyoxylase, beta-lactamase superfamily II. | Glycolate oxidase. | 0.506 |
SEM11626.1 | SEM11649.1 | SAMN04488100_12637 | SAMN04488100_12638 | Glyoxylase, beta-lactamase superfamily II. | Hypothetical protein. | 0.481 |
SEM11626.1 | SEM15055.1 | SAMN04488100_12637 | SAMN04488100_12918 | Glyoxylase, beta-lactamase superfamily II. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.778 |
SEM11626.1 | SEM27118.1 | SAMN04488100_12637 | SAMN04488100_1432 | Glyoxylase, beta-lactamase superfamily II. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.778 |
SEM11626.1 | SEM28679.1 | SAMN04488100_12637 | SAMN04488100_1453 | Glyoxylase, beta-lactamase superfamily II. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.450 |
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