STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM12738.1Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. (80 aa)    
Predicted Functional Partners:
SEM12744.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
     0.679
SEM12775.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
     0.628
SEL77671.1
Gas vesicle protein.
 
    0.525
SEM01351.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.480
corA
Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
  
 0.450
SEL99517.1
Acetyltransferase (GNAT) family protein.
  
     0.437
SEM20282.1
Two component transcriptional regulator, LytTR family.
   
    0.404
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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