STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM25281.1Copper chaperone CopZ. (67 aa)    
Predicted Functional Partners:
SEM25763.1
Cu+-exporting ATPase.
 
 0.748
SEM25790.1
Copper transport repressor, CopY/TcrY family.
 
  
 0.680
SEM26528.1
Cu+-exporting ATPase.
 
  0.636
SEM26554.1
Copper transport repressor, CopY/TcrY family.
 
  
 0.631
SEM25661.1
Cu2+-exporting ATPase.
 
  0.628
SEM26511.1
Copper chaperone CopZ.
  
 
0.592
SEM19382.1
Cu2+-exporting ATPase.
  
  0.571
SEM30502.1
Cd2+/Zn2+-exporting ATPase.
  
  0.571
SEM30598.1
Cd2+/Zn2+-exporting ATPase.
  
  0.571
SEM30397.1
Cd2+/Zn2+-exporting ATPase.
  
  0.571
Your Current Organism:
Alkalibacterium putridalgicola
NCBI taxonomy Id: 426703
Other names: A. putridalgicola, Alkalibacterium putridalgicola Ishikawa et al. 2009, DSM 19182, NBRC 103243, NRIC 0720, strain T129-2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.