Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL62574.1 | SEM30715.1 | SAMN04488100_10584 | SAMN04488100_14718 | spoIIIJ-associated protein. | Prolipoprotein diacylglyceryl transferase. | 0.479 |
SEL62574.1 | yidC | SAMN04488100_10584 | SAMN04488100_10585 | spoIIIJ-associated protein. | YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.909 |
SEL62574.1 | yidC-2 | SAMN04488100_10584 | SAMN04488100_10818 | spoIIIJ-associated protein. | YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily. | 0.775 |
SEL66168.1 | SEM30715.1 | SAMN04488100_10671 | SAMN04488100_14718 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase. | 0.474 |
SEM30643.1 | SEM30662.1 | SAMN04488100_14715 | SAMN04488100_14716 | Copper chaperone CopZ. | Copper chaperone CopZ. | 0.416 |
SEM30643.1 | SEM30686.1 | SAMN04488100_14715 | SAMN04488100_14717 | Copper chaperone CopZ. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.515 |
SEM30643.1 | SEM30715.1 | SAMN04488100_14715 | SAMN04488100_14718 | Copper chaperone CopZ. | Prolipoprotein diacylglyceryl transferase. | 0.404 |
SEM30662.1 | SEM30643.1 | SAMN04488100_14716 | SAMN04488100_14715 | Copper chaperone CopZ. | Copper chaperone CopZ. | 0.416 |
SEM30662.1 | SEM30686.1 | SAMN04488100_14716 | SAMN04488100_14717 | Copper chaperone CopZ. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.622 |
SEM30662.1 | SEM30715.1 | SAMN04488100_14716 | SAMN04488100_14718 | Copper chaperone CopZ. | Prolipoprotein diacylglyceryl transferase. | 0.496 |
SEM30686.1 | SEM30643.1 | SAMN04488100_14717 | SAMN04488100_14715 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Copper chaperone CopZ. | 0.515 |
SEM30686.1 | SEM30662.1 | SAMN04488100_14717 | SAMN04488100_14716 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Copper chaperone CopZ. | 0.622 |
SEM30686.1 | SEM30715.1 | SAMN04488100_14717 | SAMN04488100_14718 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Prolipoprotein diacylglyceryl transferase. | 0.545 |
SEM30715.1 | SEL62574.1 | SAMN04488100_14718 | SAMN04488100_10584 | Prolipoprotein diacylglyceryl transferase. | spoIIIJ-associated protein. | 0.479 |
SEM30715.1 | SEL66168.1 | SAMN04488100_14718 | SAMN04488100_10671 | Prolipoprotein diacylglyceryl transferase. | Hypothetical protein. | 0.474 |
SEM30715.1 | SEM30643.1 | SAMN04488100_14718 | SAMN04488100_14715 | Prolipoprotein diacylglyceryl transferase. | Copper chaperone CopZ. | 0.404 |
SEM30715.1 | SEM30662.1 | SAMN04488100_14718 | SAMN04488100_14716 | Prolipoprotein diacylglyceryl transferase. | Copper chaperone CopZ. | 0.496 |
SEM30715.1 | SEM30686.1 | SAMN04488100_14718 | SAMN04488100_14717 | Prolipoprotein diacylglyceryl transferase. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.545 |
SEM30715.1 | gpsA | SAMN04488100_14718 | SAMN04488100_11643 | Prolipoprotein diacylglyceryl transferase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.457 |
SEM30715.1 | hprK | SAMN04488100_14718 | SAMN04488100_11641 | Prolipoprotein diacylglyceryl transferase. | Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...] | 0.439 |
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