STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNYG_12278Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
FNYG_00900
BZIP domain-containing protein.
   
 0.821
FNYG_07479
Uncharacterized protein.
    
 0.707
FNYG_10961
DHR10 domain-containing protein.
    
 0.700
FNYG_00873
Uncharacterized protein.
    
  0.662
FNYG_08949
Uncharacterized protein.
    
 0.629
FNYG_10412
Uncharacterized protein.
    
 0.598
FNYG_11613
HORMA domain-containing protein.
    
  0.588
FNYG_14323
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.563
FNYG_06797
Hist_deacetyl domain-containing protein.
    
 0.563
FNYG_05048
Uncharacterized protein.
    
 
 0.556
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.