STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNYG_12166SUI1 domain-containing protein. (621 aa)    
Predicted Functional Partners:
FNYG_11799
WD_REPEATS_REGION domain-containing protein.
    
   0.897
FNYG_04192
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
    
   0.887
FNYG_04971
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.879
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
 
 0.874
FNYG_03328
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.804
FNYG_09339
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.801
FNYG_07531
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.801
FNYG_04908
Ribosomal_S10 domain-containing protein.
    
   0.801
FNYG_04760
Uncharacterized protein.
    
   0.799
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.796
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.