STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNYG_08404Uncharacterized protein; Belongs to the DEAD box helicase family. (539 aa)    
Predicted Functional Partners:
FNYG_04850
Sas10 domain-containing protein.
   
 0.993
FNYG_14327
Uncharacterized protein.
   
 0.992
FNYG_02053
U3 small nucleolar RNA-associated protein 22.
   
 0.987
FNYG_11052
RRM domain-containing protein.
   
 
 0.981
FNYG_00452
WD_REPEATS_REGION domain-containing protein.
   
 0.973
FNYG_03606
Uncharacterized protein.
  
0.962
FNYG_10976
Uncharacterized protein.
   
 0.960
FNYG_10414
Uncharacterized protein.
   
 
 0.958
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.953
FNYG_00431
Utp12 domain-containing protein.
   
 0.952
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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