FNYG_07481 protein (Fusarium nygamai) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FNYG_07481

Uncharacterized protein. (623 aa)

Predicted Functional Partners:

FNYG_14964

0.766

FNYG_02110

0.766

FNYG_13009

0.751

FNYG_05331

0.751

FNYG_00889

0.751

FNYG_00890

0.751

FNYG_05893

0.690

FNYG_04134

0.690

FNYG_02154

0.690

FNYG_09041

0.689

Your Current Organism:

Fusarium nygamai

NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FNYG_00889	FNYG_02110	A0A2K0WU67	A0A2K0WQD0	CIA30 domain-containing protein.	UmuC domain-containing protein.	0.888
FNYG_00889	FNYG_02154	A0A2K0WU67	A0A2K0WQG3	CIA30 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.866
FNYG_00889	FNYG_04134	A0A2K0WU67	A0A2K0WJK8	CIA30 domain-containing protein.	Uncharacterized protein.	0.866
FNYG_00889	FNYG_05893	A0A2K0WU67	A0A2K0WEP9	CIA30 domain-containing protein.	AN1-type domain-containing protein.	0.866
FNYG_00889	FNYG_07481	A0A2K0WU67	A0A2K0W9U4	CIA30 domain-containing protein.	Uncharacterized protein.	0.751
FNYG_00889	FNYG_09041	A0A2K0WU67	A0A2K0W5K5	CIA30 domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.825
FNYG_00889	FNYG_14964	A0A2K0WU67	A0A2K0UNC8	CIA30 domain-containing protein.	UmuC domain-containing protein.	0.827
FNYG_00890	FNYG_02110	A0A2K0WUA9	A0A2K0WQD0	BZIP domain-containing protein.	UmuC domain-containing protein.	0.888
FNYG_00890	FNYG_02154	A0A2K0WUA9	A0A2K0WQG3	BZIP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.866
FNYG_00890	FNYG_04134	A0A2K0WUA9	A0A2K0WJK8	BZIP domain-containing protein.	Uncharacterized protein.	0.866
FNYG_00890	FNYG_05893	A0A2K0WUA9	A0A2K0WEP9	BZIP domain-containing protein.	AN1-type domain-containing protein.	0.866
FNYG_00890	FNYG_07481	A0A2K0WUA9	A0A2K0W9U4	BZIP domain-containing protein.	Uncharacterized protein.	0.751
FNYG_00890	FNYG_09041	A0A2K0WUA9	A0A2K0W5K5	BZIP domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.825
FNYG_00890	FNYG_14964	A0A2K0WUA9	A0A2K0UNC8	BZIP domain-containing protein.	UmuC domain-containing protein.	0.827
FNYG_02110	FNYG_00889	A0A2K0WQD0	A0A2K0WU67	UmuC domain-containing protein.	CIA30 domain-containing protein.	0.888
FNYG_02110	FNYG_00890	A0A2K0WQD0	A0A2K0WUA9	UmuC domain-containing protein.	BZIP domain-containing protein.	0.888
FNYG_02110	FNYG_02154	A0A2K0WQD0	A0A2K0WQG3	UmuC domain-containing protein.	Ubiquitin-like domain-containing protein.	0.844
FNYG_02110	FNYG_04134	A0A2K0WQD0	A0A2K0WJK8	UmuC domain-containing protein.	Uncharacterized protein.	0.844
FNYG_02110	FNYG_05331	A0A2K0WQD0	A0A2K0WG98	UmuC domain-containing protein.	Ubiquitin-like domain-containing protein.	0.888
FNYG_02110	FNYG_05893	A0A2K0WQD0	A0A2K0WEP9	UmuC domain-containing protein.	AN1-type domain-containing protein.	0.844