Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FNYG_00046 | FNYG_01880 | A0A2K0WWD9 | A0A2K0WR90 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.910 |
FNYG_00046 | FNYG_03336 | A0A2K0WWD9 | A0A2K0WL64 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | WD_REPEATS_REGION domain-containing protein. | 0.919 |
FNYG_00046 | FNYG_06334 | A0A2K0WWD9 | A0A2K0WDA8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | CBF domain-containing protein. | 0.881 |
FNYG_00046 | FNYG_06745 | A0A2K0WWD9 | A0A2K0WCN1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.892 |
FNYG_00046 | FNYG_07079 | A0A2K0WWD9 | A0A2K0WB19 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.813 |
FNYG_00046 | FNYG_07545 | A0A2K0WWD9 | A0A2K0WA03 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.690 |
FNYG_00046 | FNYG_07690 | A0A2K0WWD9 | A0A2K0W974 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | J domain-containing protein. | 0.560 |
FNYG_00046 | FNYG_08973 | A0A2K0WWD9 | A0A2K0W5W1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Brix domain-containing protein. | 0.912 |
FNYG_00046 | FNYG_14519 | A0A2K0WWD9 | A0A2K0USK8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.919 |
FNYG_00046 | TEF | A0A2K0WWD9 | A0A2K0VZ16 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.437 |
FNYG_01880 | FNYG_00046 | A0A2K0WR90 | A0A2K0WWD9 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.910 |
FNYG_01880 | FNYG_03336 | A0A2K0WR90 | A0A2K0WL64 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
FNYG_01880 | FNYG_06334 | A0A2K0WR90 | A0A2K0WDA8 | Uncharacterized protein. | CBF domain-containing protein. | 0.895 |
FNYG_01880 | FNYG_06745 | A0A2K0WR90 | A0A2K0WCN1 | Uncharacterized protein. | Uncharacterized protein. | 0.955 |
FNYG_01880 | FNYG_07079 | A0A2K0WR90 | A0A2K0WB19 | Uncharacterized protein. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.856 |
FNYG_01880 | FNYG_07545 | A0A2K0WR90 | A0A2K0WA03 | Uncharacterized protein. | Uncharacterized protein. | 0.551 |
FNYG_01880 | FNYG_07690 | A0A2K0WR90 | A0A2K0W974 | Uncharacterized protein. | J domain-containing protein. | 0.627 |
FNYG_01880 | FNYG_08973 | A0A2K0WR90 | A0A2K0W5W1 | Uncharacterized protein. | Brix domain-containing protein. | 0.869 |
FNYG_01880 | FNYG_14519 | A0A2K0WR90 | A0A2K0USK8 | Uncharacterized protein. | Uncharacterized protein. | 0.939 |
FNYG_03336 | FNYG_00046 | A0A2K0WL64 | A0A2K0WWD9 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.919 |
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