STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNYG_04444Fungal_trans domain-containing protein. (565 aa)    
Predicted Functional Partners:
FNYG_02392
Uncharacterized protein; Belongs to the actin family.
    
 0.779
FNYG_02394
YL1_C domain-containing protein.
    
 0.761
FNYG_08245
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.759
FNYG_02247
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.753
FNYG_03603
Uncharacterized protein; Belongs to the actin family.
    
  0.739
FNYG_06189
Uncharacterized protein; Belongs to the actin family.
    
  0.681
FNYG_03525
Uncharacterized protein.
    
  0.681
FNYG_05860
Uncharacterized protein.
    
  0.641
FNYG_06596
PCI domain-containing protein.
    
  0.634
FNYG_07094
Amidase domain-containing protein.
    
  0.632
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.