STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNYG_04190RNA-dependent RNA polymerase. (1192 aa)    
Predicted Functional Partners:
FNYG_09392
Uncharacterized protein; Belongs to the argonaute family.
  
 
 
 0.557
FNYG_13721
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.522
FNYG_00448
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.518
FNYG_14419
Uncharacterized protein.
    
 
 0.503
FNYG_06965
Helicase ATP-binding domain-containing protein.
     
 0.500
FNYG_02559
AAA_12 domain-containing protein.
     
 0.500
FNYG_07706
Uncharacterized protein.
    
 
 0.477
FNYG_04255
Uncharacterized protein.
     
 0.461
FNYG_06586
C3H1-type domain-containing protein.
    
 
 0.453
FNYG_01386
Uncharacterized protein.
    
 
 0.453
Your Current Organism:
Fusarium nygamai
NCBI taxonomy Id: 42673
Other names: ATCC 58555, BBA 69862, CBS 749.97, DAOM 225148, F. nygamai, Gibberella nygamai, IMI 375354, NRRL 13448
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