STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD80174.1Nuclease-related domain-containing protein. (311 aa)    
Predicted Functional Partners:
SDE05382.1
RNA polymerase sigma factor, sigma-70 family.
  
     0.563
SDD80207.1
Hypothetical protein.
 
     0.554
SDE27315.1
Putative cell-wall binding lipoprotein.
  
     0.547
SDD80140.1
Protein of unknown function.
       0.529
SDE92729.1
Hypothetical protein.
  
     0.521
SDE88302.1
Hypothetical protein.
  
     0.519
SDE53946.1
Hypothetical protein.
  
     0.485
SDE61475.1
Hypothetical protein.
  
     0.485
SDD94130.1
O-acetylhomoserine (thiol)-lyase.
   
    0.452
SDD91322.1
Phospholipase_D-nuclease N-terminal.
  
     0.447
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.