STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD91322.1Phospholipase_D-nuclease N-terminal. (69 aa)    
Predicted Functional Partners:
SDD91398.1
ABC-2 type transport system permease protein.
 
    0.970
SDD91359.1
ABC-2 type transport system ATP-binding protein.
 
    0.900
SDD91439.1
CBS domain-containing protein.
       0.741
SDE25203.1
Nucleotidyltransferase-like.
  
    0.614
SDD91282.1
Threonine/homoserine efflux transporter RhtA.
 
     0.607
SDE49195.1
YpjP-like protein.
  
     0.535
SDD91148.1
Hypothetical protein.
  
     0.481
SDE57606.1
Putative zincin peptidase.
  
     0.468
SDD80174.1
Nuclease-related domain-containing protein.
  
     0.447
SDE27315.1
Putative cell-wall binding lipoprotein.
  
     0.442
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.