STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD91359.1ABC-2 type transport system ATP-binding protein. (297 aa)    
Predicted Functional Partners:
SDD91398.1
ABC-2 type transport system permease protein.
 
  0.978
SDD91322.1
Phospholipase_D-nuclease N-terminal.
 
    0.900
SDD91439.1
CBS domain-containing protein.
  
    0.765
SDD77420.1
ABC-2 type transport system permease protein.
  
  0.737
SDE27873.1
ABC-2 family transporter protein.
  
  0.735
SDE81662.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.698
SDD97441.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.691
SDE07451.1
Putative ABC transport system ATP-binding protein.
 
 
 
0.679
SDE81090.1
Acetoin utilization transport system ATP-binding protein.
 
 
 
0.649
SDE24865.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.633
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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