STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD91026.1Polar amino acid transport system ATP-binding protein. (242 aa)    
Predicted Functional Partners:
SDD90986.1
Polar amino acid transport system permease protein.
 0.998
SDE07560.1
Polar amino acid transport system permease protein.
 0.997
SDD90924.1
Polar amino acid transport system substrate-binding protein.
 0.995
SDE20928.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.950
SDE20950.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.950
SDE07531.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.948
SDE58887.1
Putative ABC transport system permease protein.
 
   
  0.927
SDD99666.1
FtsX-like permease family protein.
 
   
  0.907
SDE85181.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.889
SDE24984.1
Peptide/nickel transport system permease protein.
 
   
  0.801
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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