STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD92827.1NitT/TauT family transport system permease protein. (268 aa)    
Predicted Functional Partners:
SDD92859.1
NitT/TauT family transport system ATP-binding protein.
 
 0.988
SDD92902.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.980
SDD94234.1
NitT/TauT family transport system ATP-binding protein.
 
 0.952
SDD94294.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.930
SDE10860.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.912
SDE10776.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 
 0.790
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
  0.626
SDD92778.1
Hypothetical protein.
       0.474
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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