STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE18247.1Predicted Zn-dependent peptidase. (432 aa)    
Predicted Functional Partners:
SDE33557.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.999
SDE18277.1
Predicted Zn-dependent peptidase.
 
  
 0.985
SDE09630.1
Sarcosine oxidase subunit alpha.
   
 0.899
SDE68016.1
Glycine/D-amino acid oxidase.
   
 0.877
SDE15340.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
   
 0.873
SDE09607.1
BFD-like [2Fe-2S] binding domain-containing protein.
  
   0.865
SDE33626.1
Cytochrome c oxidase subunit 3.
   
  0.822
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.791
SDE18218.1
3-oxoacyl-[acyl-carrier protein] reductase.
      0.773
SDE15288.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
    
  0.766
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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