STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE18358.1Simple sugar transport system ATP-binding protein. (518 aa)    
Predicted Functional Partners:
SDE18303.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDE18332.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDE18387.1
Basic membrane protein A.
 
 0.997
SDE18247.1
Predicted Zn-dependent peptidase.
       0.526
SDE18277.1
Predicted Zn-dependent peptidase.
       0.526
SDE18218.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.480
SDE18413.1
GntR family transcriptional regulator.
  
    0.450
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.