STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE28098.13-hydroxyisobutyrate dehydrogenase. (324 aa)    
Predicted Functional Partners:
SDE28552.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.923
SDE51156.1
propionyl-CoA carboxylase beta chain.
   
 
  0.915
SDE54825.1
Fructose-bisphosphate aldolase, class II.
 
    0.904
SDE94446.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.804
SDE62765.1
acetyl-CoA synthetase.
  
 
  0.712
SDE63760.1
acetyl-CoA synthetase.
  
 
  0.712
SDD96857.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.650
SDE74358.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
 
  0.650
SDE46219.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.648
SDE88267.1
Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.648
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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