STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE39563.1Phosphotransferase enzyme family protein. (290 aa)    
Predicted Functional Partners:
SDE39533.1
Morphogenetic protein associated with SpoVID.
       0.773
SDE94446.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.704
SDE39505.1
Hypothetical protein.
       0.552
SDD79050.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.428
SDD83927.1
Acetyltransferase (GNAT) family protein.
    
  0.428
SDD85197.1
Protein N-acetyltransferase, RimJ/RimL family.
    
  0.428
SDD87056.1
Ribosomal-protein-serine acetyltransferase.
    
  0.428
SDD99437.1
Hypothetical protein.
    
  0.428
SDE24132.1
Ribosomal-protein-alanine N-acetyltransferase.
    
  0.428
SDE22720.1
Ribosomal-protein-alanine N-acetyltransferase.
    
  0.428
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.