STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE67555.1Two-component signal transduction system YycFG, regulatory protein YycI. (269 aa)    
Predicted Functional Partners:
SDE67525.1
Two-component signal transduction system YycFG, regulatory protein YycH.
 
  
 0.974
SDE67495.1
Two-component system, OmpR family, sensor histidine kinase VicK.
 
  
 0.887
SDE67580.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
 
  
 0.867
SDE67463.1
Two-component system, OmpR family, response regulator VicR.
  
    0.784
SDE16482.1
Uncharacterized protein YpbB.
  
     0.746
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.744
SDE57780.1
ABC-2 type transport system permease protein.
  
     0.725
SDE46387.1
Uncharacterized membrane protein, required for colicin V production.
  
     0.721
SDE40658.1
Protein of unknown function.
  
     0.704
SDE61678.1
Replicative DNA helicase loader DnaB.
  
     0.701
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.