STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE72573.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SDE72599.1
Glyoxalase family protein.
       0.673
SDE24512.1
Hypothetical protein.
  
    0.529
SDD82393.1
Putative NADH-flavin reductase.
   
    0.517
SDD83411.1
Dihydrofolate reductase.
   
    0.509
SDD91561.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
   
    0.509
SDE23682.1
Proton-dependent oligopeptide transporter, POT family.
   
    0.509
SDE81420.1
Uncharacterized protein conserved in bacteria.
   
    0.509
SDE05061.1
General stress protein 26.
   
    0.507
SDE69002.1
Iron-containing alcohol dehydrogenase.
   
    0.480
SDE57494.1
Ribosomal protein S18 acetylase RimI.
   
    0.455
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.