STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE80717.1Protein of unknown function. (260 aa)    
Predicted Functional Partners:
SDE53056.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
     0.592
SDE97393.1
Polysaccharide deacetylase family sporulation protein PdaB.
 
      0.562
SDE10405.1
Hypothetical protein.
  
 
 0.490
SDE10428.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.490
SDD92902.1
NitT/TauT family transport system substrate-binding protein.
  
     0.485
SDE80691.1
Cysteine-rich secretory protein family protein.
       0.456
SDD93443.1
Succinyl-diaminopimelate desuccinylase.
  
  
  0.451
SDE77405.1
Stage II sporulation protein E.
  
     0.428
SDE48996.1
Putative membrane protein.
  
     0.425
SDE80730.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
       0.416
Your Current Organism:
Bhargavaea beijingensis
NCBI taxonomy Id: 426756
Other names: B. beijingensis, Bacillus beijingensis, Bacillus beijingensis Qiu et al. 2009, Bacillus sp. ge09, Bacillus sp. ge10, Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6762, DSM 19037, strain ge10
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