Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD80244.1 | SDE27315.1 | SAMN04488126_101136 | SAMN04488126_10611 | Acetyltransferase (GNAT) domain-containing protein. | Putative cell-wall binding lipoprotein. | 0.749 |
SDD80244.1 | SDE88557.1 | SAMN04488126_101136 | SAMN04488126_12711 | Acetyltransferase (GNAT) domain-containing protein. | Nucleoside recognition. | 0.574 |
SDE27315.1 | SDD80244.1 | SAMN04488126_10611 | SAMN04488126_101136 | Putative cell-wall binding lipoprotein. | Acetyltransferase (GNAT) domain-containing protein. | 0.749 |
SDE27315.1 | SDE28063.1 | SAMN04488126_10611 | SAMN04488126_10636 | Putative cell-wall binding lipoprotein. | YkyB-like protein. | 0.560 |
SDE27315.1 | SDE88557.1 | SAMN04488126_10611 | SAMN04488126_12711 | Putative cell-wall binding lipoprotein. | Nucleoside recognition. | 0.612 |
SDE28063.1 | SDE27315.1 | SAMN04488126_10636 | SAMN04488126_10611 | YkyB-like protein. | Putative cell-wall binding lipoprotein. | 0.560 |
SDE28063.1 | SDE49866.1 | SAMN04488126_10636 | SAMN04488126_11039 | YkyB-like protein. | Nitric oxide reductase activation protein. | 0.415 |
SDE28063.1 | SDE88557.1 | SAMN04488126_10636 | SAMN04488126_12711 | YkyB-like protein. | Nucleoside recognition. | 0.580 |
SDE28063.1 | secF | SAMN04488126_10636 | SAMN04488126_10823 | YkyB-like protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.508 |
SDE49866.1 | SDE28063.1 | SAMN04488126_11039 | SAMN04488126_10636 | Nitric oxide reductase activation protein. | YkyB-like protein. | 0.415 |
SDE49866.1 | SDE88557.1 | SAMN04488126_11039 | SAMN04488126_12711 | Nitric oxide reductase activation protein. | Nucleoside recognition. | 0.454 |
SDE49866.1 | SDE88642.1 | SAMN04488126_11039 | SAMN04488126_12714 | Nitric oxide reductase activation protein. | Tetratricopeptide repeat-containing protein. | 0.443 |
SDE88557.1 | SDD80244.1 | SAMN04488126_12711 | SAMN04488126_101136 | Nucleoside recognition. | Acetyltransferase (GNAT) domain-containing protein. | 0.574 |
SDE88557.1 | SDE27315.1 | SAMN04488126_12711 | SAMN04488126_10611 | Nucleoside recognition. | Putative cell-wall binding lipoprotein. | 0.612 |
SDE88557.1 | SDE28063.1 | SAMN04488126_12711 | SAMN04488126_10636 | Nucleoside recognition. | YkyB-like protein. | 0.580 |
SDE88557.1 | SDE49866.1 | SAMN04488126_12711 | SAMN04488126_11039 | Nucleoside recognition. | Nitric oxide reductase activation protein. | 0.454 |
SDE88557.1 | SDE88583.1 | SAMN04488126_12711 | SAMN04488126_12712 | Nucleoside recognition. | Pyrophosphatase PpaX. | 0.818 |
SDE88557.1 | SDE88615.1 | SAMN04488126_12711 | SAMN04488126_12713 | Nucleoside recognition. | Acetyltransferase (isoleucine patch superfamily). | 0.809 |
SDE88557.1 | SDE88642.1 | SAMN04488126_12711 | SAMN04488126_12714 | Nucleoside recognition. | Tetratricopeptide repeat-containing protein. | 0.472 |
SDE88557.1 | hprK | SAMN04488126_12711 | SAMN04488126_1279 | Nucleoside recognition. | Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...] | 0.617 |
page 1 of 3