Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDD93152.1 | SDD93187.1 | SAMN04488126_10264 | SAMN04488126_10265 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homocysteine S-methyltransferase. | 0.999 |
| SDD93152.1 | SDD94164.1 | SAMN04488126_10264 | SAMN04488126_10295 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homoserine dehydrogenase. | 0.964 |
| SDD93152.1 | SDE68016.1 | SAMN04488126_10264 | SAMN04488126_11552 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Glycine/D-amino acid oxidase. | 0.686 |
| SDD93152.1 | SDE87278.1 | SAMN04488126_10264 | SAMN04488126_12622 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase. | 0.749 |
| SDD93152.1 | SDE95125.1 | SAMN04488126_10264 | SAMN04488126_1344 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aminotransferase. | 0.724 |
| SDD93187.1 | SDD93152.1 | SAMN04488126_10265 | SAMN04488126_10264 | Homocysteine S-methyltransferase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.999 |
| SDD93187.1 | SDD94164.1 | SAMN04488126_10265 | SAMN04488126_10295 | Homocysteine S-methyltransferase. | Homoserine dehydrogenase. | 0.981 |
| SDD93187.1 | SDE62159.1 | SAMN04488126_10265 | SAMN04488126_11352 | Homocysteine S-methyltransferase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.406 |
| SDD93187.1 | SDE68016.1 | SAMN04488126_10265 | SAMN04488126_11552 | Homocysteine S-methyltransferase. | Glycine/D-amino acid oxidase. | 0.733 |
| SDD93187.1 | SDE87278.1 | SAMN04488126_10265 | SAMN04488126_12622 | Homocysteine S-methyltransferase. | Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase. | 0.619 |
| SDD93187.1 | SDE95125.1 | SAMN04488126_10265 | SAMN04488126_1344 | Homocysteine S-methyltransferase. | Aminotransferase. | 0.789 |
| SDD93187.1 | lysA | SAMN04488126_10265 | SAMN04488126_104123 | Homocysteine S-methyltransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.468 |
| SDD93187.1 | pheA | SAMN04488126_10265 | SAMN04488126_1089 | Homocysteine S-methyltransferase. | Prephenate dehydratase. | 0.557 |
| SDD94164.1 | SDD93152.1 | SAMN04488126_10295 | SAMN04488126_10264 | Homoserine dehydrogenase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.964 |
| SDD94164.1 | SDD93187.1 | SAMN04488126_10295 | SAMN04488126_10265 | Homoserine dehydrogenase. | Homocysteine S-methyltransferase. | 0.981 |
| SDD94164.1 | SDE87278.1 | SAMN04488126_10295 | SAMN04488126_12622 | Homoserine dehydrogenase. | Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase. | 0.628 |
| SDD94164.1 | SDE95125.1 | SAMN04488126_10295 | SAMN04488126_1344 | Homoserine dehydrogenase. | Aminotransferase. | 0.684 |
| SDD94164.1 | lysA | SAMN04488126_10295 | SAMN04488126_104123 | Homoserine dehydrogenase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.846 |
| SDE62159.1 | SDD93187.1 | SAMN04488126_11352 | SAMN04488126_10265 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Homocysteine S-methyltransferase. | 0.406 |
| SDE62159.1 | SDE64072.1 | SAMN04488126_11352 | SAMN04488126_11411 | Pyruvate kinase; Belongs to the pyruvate kinase family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase. | 0.479 |
page 1 of 4