STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI74741.1Spermidine/putrescine transport system substrate-binding protein. (358 aa)    
Predicted Functional Partners:
SEI74668.1
Spermidine/putrescine transport system permease protein.
 
 
 0.999
SEI74700.1
Spermidine/putrescine transport system permease protein.
 
 0.999
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.998
SEI80204.1
iron(III) transport system permease protein.
 
 
 0.915
SEJ29226.1
Osmoprotectant transport system ATP-binding protein.
  
 
 0.884
SEI74584.1
Transcriptional regulator, XRE family with cupin sensor.
 
   
 0.805
potA-2
iron(III) transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
  0.750
SEI80161.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.730
SEI62573.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.647
SEI81010.1
Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.630
Your Current Organism:
Bhargavaea ginsengi
NCBI taxonomy Id: 426757
Other names: B. ginsengi, Bacillus ginsengi, Bacillus ginsengi Qiu et al. 2009, Bacillus sp. ge14, Bacillus sp. ge15, Bhargavaea ginsengi (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6763, DSM 19038, strain ge14
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